Genomics

• metagenomics of the skin
  8 September 2014

  References
  The future of skin metagenomics. Mathieu A, Vogel TM, Simonet P. Res Microbiol. 2014 Feb-Mar;165(2):69-76. doi:10.1016/j.resmic.2013.12.002 . #PMID: 24361423#

• NGS in genomics
  7 January 2014

  References
  Zhang, J., Chiodini, R., Badr, A., Zhang, G. January 18, 2011. The impact of next-generation sequencing on genomics. Journal of Genetics and Genomics

• pathogenic incidental findings
  5 January 2014

  pathogenic IFs
  References
  Actionable, pathogenic incidental findings in 1,000 participants’ exomes. Dorschner MO, Amendola LM, Turner EH, Robertson PD, Shirts BH, Gallego CJ, Bennett RL, Jones KL, Tokita MJ, Bennett JT, Kim JH, Rosenthal EA, Kim DS; National Heart, Lung, and Blood Institute Grand Opportunity Exome Sequencing Project, Tabor HK, Bamshad MJ, Motulsky AG, Scott CR, Pritchard CC, Walsh T, Burke W, Raskind WH, Byers P, Hisama FM, Nickerson DA, Jarvik GP. Am J Hum Genet. 2013 (...)

• cancer genome databases
  25 June 2013

  cancer genome database
  Databases
  TCGA
  ICGC
  CaBIG
  COSMIC
  Cancer Genome Workbench
  UCSC Cancer Genomic Browser
  GEO
  MyCancerGenome
  AGCOH
  Oncomine
  Caris Molecular Intelligence (CMI)
  Blogs
  http://blog.openhelix.eu/?p=16191

• whole-genome sequencing on plasma cell-free DNA
  10 March 2013

  References
  Detection of chromosomal alterations in the circulation of cancer patients with whole-genome sequencing. Leary RJ, Sausen M, Kinde I, Papadopoulos N, Carpten JD, Craig D, O’Shaughnessy J, Kinzler KW, Parmigiani G, Vogelstein B, Diaz LA Jr, Velculescu VE. Sci Transl Med. 2012 Nov 28;4(162):162ra154. doi: 10.1126/scitranslmed.3004742 . PMID: #23197571#

• cancer whole-genome sequencing
  17 April 2011

  cancer WGS, WCGS, oncogenome, whole cancer genome sequencing; cancer genome sequencing, oncogenome sequencing
  Videos
  Comparison of primary and metastatic acral melanoma by whole genome sequencing
  Video: Greg Tyrelle - Complete Genomics - Whole Oncogenome Sequencing: Is tomorrow today?
  See also
  cancer exome sequencing
  Reviews
  Detection of chromosomal alterations in the circulation of cancer patients with whole-genome sequencing. Leary RJ, Sausen M, Kinde I, Papadopoulos N, Carpten (...)

• personal genomics
  7 March 2010

  Personalized genomic information; personalized genomics

• 1000 genomes project
  23 February 2010

  References
  Impact of the 1000 Genomes Project on the next wave of pharmacogenomic discovery. Zhang W, Dolan ME. Pharmacogenomics. 2010 Feb;11(2):249-56. PMID: #20136363#

• high-dimensional data spaces
  6 January 2008

  high dimensionality

• microbial genomics
  28 March 2007

  See also
  Genomics

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